PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0194s0043.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 223aa    MW: 24455.7 Da    PI: 9.6046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0194s0043.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-18107158256
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          +y+GVr+++ +g+++AeIrdp  ng  +r +lg+f tae+Aa a+++a+ +++g+
  Kalax.0194s0043.1.p 107 HYRGVRRRP-WGKFAAEIRDPARNG--ARLWLGTFATAEDAAVAYDRAAFRMRGA 158
                          7********.**********97676..**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.1E-31106165IPR001471AP2/ERF domain
PROSITE profilePS5103224.25107165IPR001471AP2/ERF domain
SMARTSM003802.7E-36107171IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-23107167IPR016177DNA-binding domain
PfamPF008473.9E-12107157IPR001471AP2/ERF domain
CDDcd000181.13E-28107165No hitNo description
PRINTSPR003673.5E-10108119IPR001471AP2/ERF domain
PRINTSPR003673.5E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MCDQVCSDND LAFLESVRRH LLDDSETPMM FPTAPRYART SSSSSLFTEN WGELPLQEND  60
PEDMVLLGVL RDAERAGWVP SLKAEPVEVD RSGGGGGLAV GPAKGRHYRG VRRRPWGKFA  120
AEIRDPARNG ARLWLGTFAT AEDAAVAYDR AAFRMRGARA LLNFPLRINS GEPSPVRITA  180
KRSSPEPSSS SSGRVGSEKK MRKVVKREEV AMWTSVDHLL VS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-40103172170ATERF1
3gcc_A3e-40103172170ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003538752.26e-77PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotO803375e-68EF100_ARATH; Ethylene-responsive transcription factor 1A
TrEMBLK7LMW67e-77K7LMW6_SOYBN; Uncharacterized protein
STRINGGLYMA11G03910.22e-76(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.19e-55ethylene responsive element binding factor 1